Hopefully not. I like Pokemon and everything, was my first game from gba (emerald), but you can't combine Pokemon with Fire emblem Heroes. Is like saying, I like peanut butter and I like cereals, and I combine them for breakfast. Disgusting. (Nah I found my cereals).
Why not ? The logic is pretty similar :
You begin with 3 starters, Red (Alfonse/Charmander), Blue (Sharenna/Squirtle) and Green (Anna/Bulbasaur)...
And Red > Blue > Green > Red
Wait just a dang-gone-ghost-eatin-minute. Pokemon x Fire Emblem Heroes sounds weird, but I can also see it happen. I'm actually curious how it will work if it does happen.